Article

Mutation Induction in a Yemeni Coffee Variety Using Sodium Azide and Peganum harmala seeds Extract

The research was carried out during 2023/2024, in the laboratory of the Participatory Foundation for Research and Dissemination and the Faculty of Agriculture, Foods, and Environment, Sana'a University, Yemen under controlled condition, for the objective to improve genetic variation in Yemeni coffee. The seeds of a local variety "Udini" were used, and four treatments, namely the control without any treatment of the seeds, the second treatment was soaked with sodium azide solution at a concentration of 0.1 molar and the third treatment was treated with the seeds extract of the Harmel plant (Peganum harmala L.), and the fourth by dipping the roots of the coffee seedlings after germination with the extract of Harmel, in this treatment all the plants were died within the first weeks of dipping the seedling roots in the Harmal extract, this indicates the importance of using lower concentrations and immersion times. The results showed that the use of mutational chemicals had a role in causing changes in the speed and rate of seed germination, in the length of seedlings, and in the number and length of roots, and the analysis of the frequency curves showed that the distribution of the frequency of the natural plant population was clearly affected in the treatments by the mutagenic substances compared to the natural control group in relation to the most traits. The phenotypic transformations that appeared on the cotyledon leaves and on the real leaves developing on the first node were recorded, and seven forms of deformations were distinguished, represented in heterogeneity in the cotyledon leaves and in the real leaves and in the cotyledon leaves and real leaves together. These results clearly indicate that mutations can be used as a tool to improve genetic variation in Yemeni coffee.

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Buthaina Othman Abdullah Bahwirth
طالبة قسم علوم البستنة وتقاناتها، كلية الزراعة والاغذية والبيئة، جامعة صنعاء، صنعاء، اليمن.
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Amin Abdo Sofian AL-Hakimi
Department of Agronomy and Plant Breeding, Faculty of Agriculture, Foods, Environment, Sana'a University, Sana’a, Yemen. قسم علوم المحاصيل والتحسين الوراثي، كلية الزراعة والاغذية والبيئة، جامعة صنعاء، صنعاء، اليمن. Department of Agronomy and Plant Breeding, Faculty of Agriculture, Foods, Environment, Sana'a University, Sana’a, Yemen.
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Mahasen Al-Munibari
Department of Horticulture and its Technologies, Faculty of Agriculture, Foods, Environment, Sana'a University, Sana’a, Yemen. جامعة صنعاء
12750
Organization, I.C., Total production by all exporting countries. 2016. asb-2016.pdf
12751
Silva, M.d.C., et al., Coffee resistance to the main diseases: leaf rust and coffee berry disease. 2006. 18: p. 119-147. .(PDF) Coffee resistance to the main diseases: Leaf rust and coffee berry disease
12752
dos Santos, T.B., et al., Expression of three galactinol synthase isoforms in Coffea arabica L. and accumulation of raffinose and stachyose in response to abiotic stresses. 2011. 49(4): p. 441-448. Involvement of the galactinol synthase gene in abiotic and biotic stress responses: A review on current knowledge - ScienceDirect
12753
Organization, I.C., Coffee Report and Outlook (CRO). 2023. International Coffee Organization 2023 Coffee Report and Outlook. - Free Online Library
12754
Al-Hakimi, A. and B. Allard, Collection, characterization and evaluation of Yemeni landraces of coffee (Coffea arabica L.)[electronic resource]. 2005. 32: p. 1. Al Hakimi, A.A.S. and Allard, B. (2005) Collection, Characterization and Evaluation of Yemeni Landraces of Coffee. Zagazig Journal of Agricultural Research, 32, 1-12. - References - Scientific Research Publishing
12755
Al-Hakimi, A., Agro- ecological factors affect chemical compounds and quality of Yemeni Green Coffee. University of Aden Journal of Natural and Applied Sciences., 2009: p. 13 (3): 257-264. ) in Arabic). https://www.academia.edu/17143668/English_Abstracts_for_Papers_published_in_University_of_Aden_Journal_of_Natural_and_Applied_Sciences_Volumes_9_2005_14_2010_
12756
Mishra, M. and A. Slater, Recent advances in the genetic transformation of coffee. 2012. 2012. https://www.researchgate.net/publication/230834765_Recent_Advances_in_the_Genetic_Transformation_of_Coffee
12757
Davis, A.P., et al., High extinction risk for wild coffee species and implications for coffee sector sustainability. 2019. 5(1): p. eaav3473. High extinction risk for wild coffee species and implications for coffee sector sustainability - PubMed
12758
Al-Hakimi, A., Coffee cultivation and production in Yemen, Book published by Particpatory Foundation for Reshearch and Dissmination. 2012. (in Arabic).
12759
Al-Hakimi, A., Enabah,S., Effect of drought on root and vegetative system growth in coffee seedling (Coffea arabica L.) International Journal for Scientific Research, London 2025. Vol (4): p. No (7), E-ISSN 2755-3418 https://www.researchgate.net/publication/393492480_Effect_of_drought_on_root_and_vegetative_system_growth_in_coffee_seedlings_Coffea_arabica_L_under_controlled_conditions.
12760
McCook, S. and A.J.P. Montero‐Mora, People, Planet, Coffee breeding in a time of crisis: F1 hybrids in Central America since 1990. 2024. 6(5): p. 1070-1079. (PDF) Coffee breeding in a time of crisis: F1 hybrids in Central America since 1990.
12761
Lashermes, P., et al. Molecular breeding in coffee (Coffea arabica L.). in Coffee Biotechnology and Quality: Proceedings of the 3rd International Seminar on Biotechnology in the Coffee Agro-Industry, Londrina, Brazil. 2000. Springer. . Molecular Breeding in Coffee (Coffea Arabica L.) | SpringerLink
12762
Vargas-Segura, C., et al., Sensitivity of seeds to chemical mutagens, detection of DNA polymorphisms and agro-metrical traits in M1 generation of coffee (Coffea arabica L.). 2019. 22: p. 451-464. Sci-Hub : {title} [{doi}]
12763
IAEA, International Atomic Energy Agency. https://www.iaea.org/ar/almawadie/hthth-altafarat
12764
Parry, M.A., et al., Mutation discovery for crop improvement. 2009. 60(10): p. 2817-2825. (PDF) Mutation discovery for crop improvement
12765
Saleem, M., et al., Induced mutation and in vitro techniques as a method to induce salt tolerance in Basmati rice (Oryza sauva L.). 2005. 2: p. 141-145. . (PDF) Induced mutation and in vitro techniques as a method to induce salt tolerance in Basmati rice (Oryza sauva L.)
12766
Maluszynski, M.J.P.C., Tissue and O. Culture, Officially released mutant varieties-the FAO/IAEA Database. 2001. 65(3): p. 175-177. Officially released mutant varieties - The FAO/IAEA database
12767
Shihab, A., Mutations and their role in plant breeding. University of Anbar, 2022. (in Arabic). https://agriculturecollege.uoanbar.edu.iq/News_Details.php?ID=1327.
12768
Mba, C., et al., Induced mutagenesis in plants using physical and chemical agents. 2010. 20: p. 111-130. (PDF) Induced Mutagenesis in Plants Using Physical and Chemical Agents
12769
Prina, A., et al., Mutagénesis, TILLING y EcoTILLING. 2010. (PDF) Fuentes primarias de variabilidad genética en plantas cultivadas: Mutaciones Inducidas y Genes Mutadores
12770
Srivastava, P., et al., Mutagenic effects of sodium azide on the growth and yield characteristics in wheat (Triticum aestivum L. em. Thell.). 2011. Mutagenic Effects of Sodium Azide on the Growth and Yield Characteristics in Wheat (Triticum aestivum L. em. Thell.) | Request PDF
12771
Jankowicz‐Cieslak, J. and Till, Chemical mutagenesis of seed and vegetatively propagated plants using EMS. 2016. 1(4): p. 617-635 (PDF) Chemical Mutagenesis of Mature Seed of Coffea arabica L. var. Venecia Using EMS .
12772
Ingelbrecht, I., Jankowicz-Cieslak, J., Szurman, M., Till, B. and Szarejko, I., 3rd edn. FAO/IAEA Publication, FAO, Rome, Italy, Chemical mutagenesis. 2018. (PDF) Chemical Mutagenesis of Mature Seed of Coffea arabica L. var. Venecia Using EMS
12773
Asgarpanah, J., F.J.A.J.o.p. Ramezanloo, and pharmacology, Chemistry, pharmacology and medicinal properties of Peganum harmala L. 2012. 6(22): p. 1573-1580. Title: Chemistry, Pharmacology and Medicinal Properties of Peganum harmala L
12774
Mekki, L., M.A. Hussein, and H.J.P.J.B. Mansour, Genotoxic effect of Peganum harmala extracts on the growth of Vicia faba L. and DNA using nuclear microsatellites. 2015. 47(3): p. 995-1006. . Microsoft Word - 24-14-091 final proof.doc
12775
Enaba, s., Al-Hakimi, A, Evaluation of Genetic Variation in Yemeni Coffee Landraces (Coffea arabica L.) for some Morpho-physiological Traits Related to Drought Resistance. (Accepted for publication in Sana'a University Journal of Applied Sciences and Technology ), 2025.
12776
Lashermes, P., et al., Molecular analysis of introgressive breeding in coffee (Coffea arabica L.). 2000. 100(1): p. 139-146.
12777
Carvalho, A., H. Antunes Filho, and R.J.B. Nogueira, Genética de Coffea: XX. Resultados preliminares do tratamento de sementes de café com raios-X. 1954. 13: p. XVII-XX.
12778
Till, B.J., et al., Recovery of Novel Sequence Variants in Chemically Mutagenized Seed and Vegetatively Propagated Coffea arabica L. 2024. 10(10): p. 1077.
12779
Bolívar-González, A., et al., Responses of Arabica coffee (Coffea arabica L. var. Catuaí) cell suspensions to chemically induced mutagenesis and salinity stress under in vitro culture conditions. 2018. 54(6): p. 576-589. Responses of Arabica coffee (Coffea arabica L. var. Catuaí) cell suspensions to chemically induced mutagenesis and salinity stress under in vitro culture conditions | In Vitro Cellular & Developmental Biology - Plant
12780
Jayakodi, M., et al., The barley pan-genome reveals the hidden legacy of mutation breeding. 2020. 588(7837): p. 284-289. The barley pan-genome reveals the hidden legacy - ProQuest
12781
Liu, L., et al., New mutation techniques for crop improvement in China. 2021: p. 47-52. (PDF) New mutation techniques for crop improvement in China.
12782
Oladosu, Y., et al., Principle and application of plant mutagenesis in crop improvement: a review. 2016. 30(1): p. 1-16. (PDF) Principle and application of plant mutagenesis in crop improvement: a review
12783
Nkurunziza, R., et al., Enhancing genetic diversity in Coffea arabica L. through induced mutagenesis. 2025: p. 100514. Enhancing genetic diversity in Coffea arabica L. through induced mutagenesis - ScienceDirect
12784
Dada, K.E., et al., Radiosensitivity and biological effects of gamma and X-rays on germination and seedling vigour of three Coffea arabica varieties. 2023. 42(3): p. 1582-1591. Enhancing genetic diversity in Coffea arabica L. through induced mutagenesis - ScienceDirect
12785
Mekki, L.J.C., Cytogenetic effects of crude extracts of Peganum harmala seeds and their effects on Vicia faba plants. 2014. 79(2): p. 161-172. https://www.researchgate.net/publication/278105932_Cytogenetic_Effects_of_Crude_Extracts_of_Peganum_harmala_Seeds_and_Their_Effects_on_Vicia_faba_Plants
12786
Herwibawa, B. The effects of sodium azide on seed germination and seedling growth of chili pepper (Capsicum annum L. cv. Landung). in IOP Conference Series: Earth and Environmental Science. 2018. IOP Publishing. The effects of sodium azide on seed germination and seedling growth of chili pepper (Capsicum annum L. cv. Landung) - IOPscience
12787
Abderrahman, S.M., et al., Genotoxic effects of Peganum harmala L. in relation to traditional use. 2018. 10(9): p. 167-173. Medicinal properties of Peganum harmala L. in traditional Iranian medicine and modern phytotherapy: a review - PubMed.
12788
Shao, H., et al., Phytotoxic effects and a phytotoxin from the invasive plant Xanthium italicum Moretti. 2012. 17(4): p. 4037-4046. Phytotoxic Effects and a Phytotoxin from the Invasive Plant Xanthium italicum Moretti
12789
Nyam, D.D., et al., In vitro Evaluation of the Effects of Sodium Azide on the Germination and Seedling Development of Sesamum radiatum and Sesamum indicum. 2024. 10(2): p. 50-56. (PDF) Genetic Affinity and Breeding Potential of Phenologic Traits of Acha (fonio) in Nigeria
12790
Türkoğlu, A., et al., Sodium azide as a chemical mutagen in wheat (Triticum aestivum L.): patterns of the genetic and epigenetic effects with iPBS and CRED-iPBS techniques. 2023. 13(6): p. 1242. Sodium Azide as a Chemical Mutagen in Wheat (Triticum aestivum L.): Patterns of the Genetic and Epigenetic Effects with iPBS and CRED-iPBS Techniques.
12791
Dyulgerova, B. and N. Dyulgerov, Mutagenic effect of sodium azide on winter barley cultivars. 2022. (PDF) Mutagenic effect of sodium azide on winter barley cultivars
12792
Al-Mahmudy, F., A. Bin-Hameda, and M.J.A.J. Sadder, Allelopathic effects of harmala (Peganum harmala L.) seeds on germination and seedlings growth of barley (Hordeum vulgare L.). 2024. 63(1). New β-carboline alkaloids from the seeds of Peganum harmala - ScienceDirect
12793
Khan, S., F. Al-Qurainy, and F.J.E.W.I.J.S.T. Anwar, Sodium azide: a chemical mutagen for enhancement of agronomic traits of crop plants. 2009. 4: p. 1-21. (PDF) Sodium Azide: a Chemical Mutagen for Enhancement of Agronomic Traits of Crop Plants
12794
Çoban, F.J.S.J.o.A. and F. Sciences, Optimizing Sodium Azide (NaN₃) Mutagenesis for Cumin (Cuminum cyminum L.) Improvement. 2024. 38(3): p. 427-433. dergipark.org.tr/en/download/article-file/3952231
12795
Jenks, M.A., et al., Advances in molecular breeding toward drought and salt tolerant crops. 2007. (PDF) Advances in Molecular Breeding Toward Drought and Salt Tolerant Crops
12796
Tafti, M., et al., Allelopathic effect of harmel (Peganum harmala L.) on germination and growth of three weeds. 2011.. Allelopathic effect of harmel (Peganum Harmala L.) on germination and growth of three weeds
12797
Ulukapi, K. and S.F. Ozmen, Study of the effect of irradiation (60Co) on M1 plants of common bean (Phaseolus vulgaris L.) cultivars and determined of proper doses for mutation breeding. Journal of Radiation Research Applied Sciences, 2018. 11(2): p. 157-161. https://www.academia.edu/80330303/Study_of_the_effect_of_irradiation_60_Co_on_M_1_plants_of_common_bean_Phaseolus_vulgaris_L_cultivars_and_determined_of_proper_doses_for_mutation_breeding
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Mutation Induction in a Yemeni Coffee Variety Using Sodium Azide and Peganum harmala seeds Extract. (2026). Sana’a University Journal of Applied Sciences and Technology, 4(4), 1977-1997. https://doi.org/10.59628/jast.v4i4.2538

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